Martha Careful
4 months ago
I thought this was interesting, MC (Sorry, I goofed up the Size and cant seem to fix it)
The New York Times Reported

This Shark Lives 400 Years. Its DNA May Explain Why.
Scientists have mapped the genome of the Greenland shark, which could offer clues to the animal’s extreme longevity.

 image.png You have insufficient rights to see the content.
An undersea view looking up at the surface, possibly covered in part by ice, of a Greenland shark swimming into the darkness.

In a new study, researchers identified a network of 81 genes that were found only in Greenland sharks and are known to play a role in DNA repair.Credit...WaterFrame/Alamy

By Jonathan Moens
Sept. 22, 2024, 5:01 a.m. ET
The Greenland shark is not exactly charismatic. Its hulking frame is covered by sandpaper skin. Its fins, stunted, sit awkwardly along its sides. And its eyes, perpetually cloudy, are often host to wormlike parasites that dangle as the shark slowly roams the depths of the North Atlantic and Arctic oceans.

But looks aside, the species has a surprising capacity: It can live for as long as about 400 years. Now, an international team of scientists from Europe and the United States has mapped the genome of the Greenland shark, offering scientists an opportunity to glean the secret to the shark’s outstanding longevity.

“Any research into the mechanisms of how this animal is able to live for such a long time will at some point need the genome sequence,” said Steve Hoffmann, a computational biologist at the Leibniz Institute on Aging and the Friedrich Schiller University Jena, in Germany, who led the research.

The findings, published as a preprint in bioRxiv, provide a comprehensive assembly of the shark’s genetic makeup. It also provides initial insights into the specific genes and biological mechanisms, including a network of duplicated genes involved in DNA repair, that may be responsible for the shark’s exceptional life span.

The scientists found that Greenland sharks possessed very large genomes: about 6.5 billion DNA “base pairs,” or building blocks — about twice as many as in humans, and the biggest genome of any other shark sequenced to date.
“We wouldn’t have guessed that it’s so large,” said Arne Sahm, a bioinformatician also at the Leibniz Institute on Aging and Ruhr University Bochum, who was the lead author on the study.

Surprisingly, more than two-thirds of the genome was composed of repeated genes known as transposable elements, or jumping genes. These genes insert themselves in others and self-replicate through a copy-and-paste mechanism. In doing so, they often disrupt the normal functioning of genes and may cause mutations, deletions or duplications, which can lead to the development of diseases or developmental issues in the organism.

“These are parasites, genomic parasites,” said Mr. Hoffmann. “They have a pretty bad reputation.”
The findings led the researchers to wonder how sharks could live so long if they carried such a high number of these harmful genes. They proposed that the Greenland shark might have evolved a unique way to hijack the machinery of these jumping genes to duplicate genes involved in DNA repair.

“These are animals that live longer than human beings, and they do this in the wild, without medicines or hospitals or health care,” said João Pedro de Magalhães, a molecular biogerontologist at the University of Birmingham in England, who was not involved in the study.

Studying the sharks, he added, may help scientists one day “develop cancer therapies or prevention measures, or a greater fundamental understanding of cancer that will lead to clinical benefits” in humans.

The shark’s remarkable longevity first came to light in 2016, when a landmark study published in Science used radiocarbon dating methods and modeling techniques to estimate the ages of 28 Greenland sharks. The researchers found that the oldest sharks could live for about 400 years and reached sexual maturity around age 150.

Flabbergasted, scientists from around the world have since been studying Greenland sharks to better understand how the species can live so long. Some are looking at its heart; others are homing in on its metabolism, and many are monitoring its behavior and ecology.

The pinnacle has been to unravel the Greenland shark’s genome. In the past five years, at least three teams have been racing to produce a full genome of the shark.

Hoffmann and his collaborators were the first to publish the shark’s genome, which covers around 92 percent of its entire DNA.

“We knew nothing before about its genome, and now we have a complete genome sequence,” said Steven Austad, a biologist at the University of Alabama at Birmingham, who was not involved in the study. “I think that’s great.”
Reaching this stage took extensive fieldwork, including several expeditions off the coasts of Greenland, where members of the team caught Greenland sharks, euthanized them and took tissue samples from their spinal cords.
Image

Those tissue samples were then stored at low temperatures and sent to the Leibniz Institute, where the DNA was extracted, sequenced and compared with that of other sharks. In the end, the team sequenced the DNA from brain tissue from one shark.

A key finding identified a network of 81 genes that were found only in Greenland sharks and that played a role in DNA repair.

The researchers hypothesized that regular DNA repair genes had evolved to exploit the machinery of jumping genes in order to copy and paste more of themselves. That process may have helped them to both counteract the accumulated damage caused by jumping genes and improve the shark’s DNA repair abilities.

At the center of this network was a well-known gene, called TP53, that has been implicated in DNA repair and tumor suppression. A study published in 2016 showed that elephants carried 20 copies of this gene, and scientists believe that the gene may account for the animal’s strong resistance to cancer. The gene was also found to be structurally altered in Greenland sharks, although the team is still assessing whether this change would enhance the shark’s longevity.

The shark results are interesting, Dr. Austad said, but he cautioned that duplications don’t always reveal much. “Lots of genes get duplicated and don’t have any particular consequence,” he said.

He added that researchers would need to understand how these findings apply to live cells of different types, an
effort that could entail culturing Greenland shark cells, converting them into stem cells and differentiating them into, say, heart or brain cells.


“Then you could tinker — then you could manipulate the genome,” Dr. Austad said.

Mr. Sahm said his team hoped to conduct genome sequences of species that are shorter-lived but evolutionarily very
similar to Greenland sharks, like the Pacific sleeper shark. That also might shed light on what enables Greenland sharks to live so long.

Whichever direction the research takes, Dr. Austad said, it’s an exciting time for Greenland shark research. “Now is where the fun begins,” he said. “Now that we have the genome, it’s a question of developing hypotheses and then testing them.”


Go Packers!!!!
Zero2Cool
4 months ago
They should check my DNA. I'm gonna live forever!
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Martha Careful (19h) : Congratulations Sterling Sharpe
Mucky Tundra (20h) : beast, you didn't miss much with that one. Raiders didn't update their play calls, audibles etc so the Bucs D steamrolled
buckeyepackfan (6-Feb) : That was quick, one thing Jordan said was he doesn't agree with Josh Jacobs, that the Packers need to go get a proven #1 wr
buckeyepackfan (6-Feb) : J-10VE on ESPN NOW!
beast (6-Feb) : I was young and didn't get enough sleep... fell asleep during the Buccaneers/Raiders Super Bowl
Zero2Cool (5-Feb) : Patriots / Panthers feeling is what I got. didn't watch that one either
Zero2Cool (5-Feb) : Easier to get a camera on her in the suite where she can't impact the game by being distraction???
TheKanataThrilla (5-Feb) : This is the least excited I have been in a long time for a Super Bowl. Unfortunately they both can't lose.
wpr (5-Feb) : So why don;'t they have her on the sidelines and doing the halftime fandango instead of sitting on her but in a $1,000,000 suite?
Zero2Cool (5-Feb) : Think more eyes on Super Bowl with Swift fans pulling for her TE boyfriend?
Zero2Cool (5-Feb) : She dating the TE of the Chiefs.
Zero2Cool (5-Feb) : Taylor Swift has millions of fans, yeah?
Zero2Cool (5-Feb) : They did. They are going to show the post production Sunday with plethora of ads.
wpr (5-Feb) : I thought KC already won
Zero2Cool (4-Feb) : If you wanna post about the Super Bowl, please, by all means, open a topic. They are free this month! 😁
Zero2Cool (4-Feb) : There doesn't need to be a topic. There's a playoff prediction thread.
packerfanoutwest (4-Feb) : and there no SB contest over in the other Packer forum, either
buckeyepackfan (4-Feb) : #2Officially Retires!
beast (4-Feb) : Probably no SB topic as people are wore out talking about the Chiefs, Refs and Eagles
Zero2Cool (4-Feb) : Packers reportedly have their new LB coach, promoting Sean Duggan to that role
Zero2Cool (4-Feb) : WR Cooper Kupp is being traded.
packerfanoutwest (4-Feb) : why is there no SB Prediction topic?
Zero2Cool (3-Feb) : Anthony Perkins spent 2024 as a defensive quality-control coach with the Packers.
Zero2Cool (3-Feb) : Packers lose another assistant.
Zero2Cool (3-Feb) : Defensive Player of the Year and Browns star Myles Garrett has requested a trade.
Zero2Cool (3-Feb) : deleted all my browser history and autofill and passwords. gonna be fun!
packerfanoutwest (3-Feb) : too funny
packerfanoutwest (3-Feb) : Lions QB Jared Goff was the offensive MVP
packerfanoutwest (3-Feb) : for the Pro Bowl, which is flag football
Zero2Cool (2-Feb) : Rather, the murder WAS covered up to prevent ...
Zero2Cool (2-Feb) : JFK murder was a cover-up to prevent war with Cuba/Russia.
Martha Careful (1-Feb) : I have always admired the pluck of the man
Zero2Cool (1-Feb) : I remember thinking he was going to be something good.
Mucky Tundra (1-Feb) : The Dualing Banjo!
Zero2Cool (31-Jan) : Jets have named Chris Banjo as their special teams coordinator, Former Packers player
Zero2Cool (31-Jan) : Jaguars have hired Anthony Campanile as their DC. We lose coach
Zero2Cool (30-Jan) : QB coach Sean Mannion
Zero2Cool (30-Jan) : DL Coach DeMarcus Covington
dfosterf (30-Jan) : from ft Belvoir, Quantico and points south. Somber reminder of this tragedy at Reagan Nat Airport
dfosterf (30-Jan) : So eerily quiet here in Alexandria. I live in the flight path of commercial craft coming from the south and west, plus the military craft
dfosterf (30-Jan) : So eeri
Mucky Tundra (30-Jan) : Now that's a thought, maybe they're looking at the college ranks? Maybe not head coaches but DC/assistant DCs with league experience?
beast (30-Jan) : College Coaches wouldn't want that publicly, as it would hurt recruiting and they might not get the job.
beast (30-Jan) : I thought they were supposed to publicly announce them, at least the NFL ones. Hafley was from college, so I believe different rules.
Mucky Tundra (30-Jan) : Who knows who they're interviewing? I mean, nobody knew about Hafley and then out of nowhere he was hired
beast (30-Jan) : I wonder what's taking so long with hiring a DL coach, 2 of the 3 known to interview have already been hired elsewhere.
Zero2Cool (27-Jan) : Packers coach Matt LaFleur hires Luke Getsy as senior assistant, extends Rich Bisaccia's deal
Zero2Cool (27-Jan) : Chiefs again huh? I guess another Super Bowl I'll be finding something else to do.
Mucky Tundra (27-Jan) : Chiefs Eagles...again...sigh
dfosterf (27-Jan) : Happy Birthday Dave!
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